How does RxPlora normalize the viability data on siRNA screens?

How does RxPlora normalize the viability data on siRNA screens?

RxPlora gives users the option to identify Fluor (CTF) data and normalizes it against negative (100%) and lysed cells (0%) to compute viability by plate.


$viability_percent = 100*($VDP – $lysed_plate_average)/($neg_control_plate_avg – $lysed_plate_average)

$VDP = viability_data_part i.e. column that is identified to have the fluor data for viability computations

$lysed_plate_average = average of lysed cell data per plate

$neg_control_plate_avg=average of negative controls per plate

When percent_by_plate is positive, normalized_value is the PRODUCT of percent_by_plate and viability; When percent_by_plate is negative, normalized_value is the RATIO of percent_by_plate over viability;

Go to Top